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Is it possible to generate this type of API documentation with Doxygen. If so how?

I do have all my controllers XML commented.

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HelpPage, by default, uses XmlDocumentationProvider(which depends on the default .net generated documentation) which implements System.Web.Http.Description.IDocumentationProvider...You can create a custom IDocumentationProvider and where you can read the documentation generated by Doxygen...After creating this custom provider, you can replace the default one in HelpPageConfig.cs...

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Will I be also able to match the view/UI generated and how the HelpPage looks?
yes, you would be able to...the interface that i mentioned only provides 'text' and so there would be no UI changes..

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