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From: Eric F. <ef...@ha...> - 2006-03-03 22:45:09
|
Greg,
Gregory Novak wrote:
> pcolor doesn't seem to be using the vmin and vmax values that I supply
> to it.
It is fixed in svn now. The relevant part is:
--- lib/matplotlib/axes.py (revision 2126)
+++ lib/matplotlib/axes.py (working copy)
@@ -2312,10 +2312,8 @@
if cmap is not None: assert(isinstance(cmap, Colormap))
collection.set_cmap(cmap)
collection.set_norm(norm)
+ collection.set_clim(vmin, vmax)
- if norm is not None:
- collection.set_clim(vmin, vmax)
-
self.grid(False)
x = X.compressed()
We don't want to check for norm being None, because after calling
collection.set_norm, the collection's norm is *not* None, so it is
always OK (and necessary, if we have provided values for vmin and vmax)
to call set_clim.
Eric
|
|
From: Eric F. <ef...@ha...> - 2006-03-03 22:27:50
|
Greg, Gregory Novak wrote: > pcolor doesn't seem to be using the vmin and vmax values that I supply > to it. If I do: > > X,Y = meshgrid(arange(-2,2,.1), arange(-2,2,.1)) > pcolor(X**2 + Y**2, vmin = 1., vmax=2.) > > I see a smooth paraboloid (ie, without the min/max clipping in the > center on the edge that I would expect). > > However, if I instead do: > > imshow(X**2 + Y**2, vmin = 1., vmax=2.) > > I see what I expect, a circular dark region, surrounded by a smoothly > varying ring, surrounded by a white area to the edge of the plot. > > I'm using OS X 10.4.5, Python 2.3.5, and matplotlib 0.87. Am I doing > something wrong? No, you found a bug. I have fixed it, but it may take me a little while to get it committed to svn--this will be my first commit since the switch from cvs to svn. I will send another message shortly. Eric |
|
From: Gregory N. <no...@uc...> - 2006-03-03 21:39:03
|
pcolor doesn't seem to be using the vmin and vmax values that I supply to it. If I do: X,Y = meshgrid(arange(-2,2,.1), arange(-2,2,.1)) pcolor(X**2 + Y**2, vmin = 1., vmax=2.) I see a smooth paraboloid (ie, without the min/max clipping in the center on the edge that I would expect). However, if I instead do: imshow(X**2 + Y**2, vmin = 1., vmax=2.) I see what I expect, a circular dark region, surrounded by a smoothly varying ring, surrounded by a white area to the edge of the plot. I'm using OS X 10.4.5, Python 2.3.5, and matplotlib 0.87. Am I doing something wrong? Thanks, Greg |
|
From: Michael P. M. <mo...@jp...> - 2006-03-03 20:06:50
|
Hello, I figured out the answer about aspect ratio. I see the method on the axes object. Mike |
|
From: Derek B. <db...@ya...> - 2006-03-03 17:29:52
|
I get this error:
ValueError: Domain error on eval_scalars in RendererAgg::draw_regpoly_collection
when I try to plot the scatter below. Can anyone tell me what this error means? It is completely
greek to me. Again, sorry for the huge data sample but you know...gotta be accurate.
Thanks,
Derek Basch
import matplotlib
from pylab import *
def roundUpLogDecade(x):
""" Round up to the nearest logarithmic decade"""
return 10**math.ceil(math.log10(x))
def log10Product(x, pos):
"""The two args are the value and tick position.
Label ticks with the product of the exponentiation"""
return '%1i' % (x)
prediction_experiment = [(15305.6, 18811.900000000001), (16211.4, 32857.099999999999),
(95.900000000000006, 20.534500000000001), (22925.599999999999, 1096.29), (20800.299999999999,
50000.0), (8256.3999999999996, 19166.700000000001), (61.600000000000001, 14.3163),
(2067.6999999999998, 19.166699999999999), (18.800000000000001, 166.52000000000001),
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3.6507900000000002), (372.19999999999999, 1036.97), (38.399999999999999, 1.0),
(1.3999999999999999, 4.5999999999999996), (15540.0, 32857.099999999999), (15641.9,
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(36433.400000000001, 50000.0), (198431.0, 38333.300000000003), (1167750.0, 79310.300000000003),
(25351.299999999999, 7490.6499999999996), (29013.5, 17831.599999999999), (100582.0,
82142.899999999994), (1704.0999999999999, 8846.1499999999996), (710.70000000000005, 1.0),
(4711.6000000000004, 57500.0), (21238.299999999999, 19166.700000000001), (17927.900000000001,
60526.300000000003), (540.70000000000005, 5269.2200000000003), (22351.700000000001,
25748.799999999999), (47715.599999999999, 365.07900000000001), (429.80000000000001,
12777.799999999999), (30052.5, 13283.4), (1074.8, 10795.0), (6114.1999999999998, 383333.0),
(79.599999999999994, 3098.2600000000002), (178.40000000000001, 135.62299999999999), (954.5,
17.468399999999999), (21802.700000000001, 1870.8299999999999), (148.0, 3538.46),
(931.10000000000002, 17.999400000000001), (2401.0999999999999, 958.33299999999997),
(5443.3000000000002, 527.14499999999998), (900.20000000000005, 50000.0), (1237.5,
643.03499999999997), (276.30000000000001, 153.84399999999999), (294.0, 1.0), (287.19999999999999,
5476.1899999999996), (2090.0, 47022.199999999997), (613.79999999999995, 6969.6999999999998),
(143.0, 88.652199999999993), (1493.3, 489.36200000000002), (42878.5, 64950.0),
(14928.299999999999, 460000.0), (13958.9, 5287.1000000000004), (3624.6999999999998,
51111.099999999999), (5290.3999999999996, 58420.099999999999), (888.60000000000002,
2028.9400000000001), (113587.0, 121053.0), (3165.3000000000002, 6660.29), (162.69999999999999,
3194.4400000000001), (412.10000000000002, 8.4493600000000004), (208.5, 88.461500000000001), (88.0,
3.9503699999999999), (89.5, 1.81321), (550.39999999999998, 1477.74), (109.8, 35.077800000000003),
(76.5, 766.66700000000003), (150.59999999999999, 56.0976), (173.69999999999999,
16428.599999999999), (167.59999999999999, 50.0), (624.10000000000002, 83.306200000000004),
(38.600000000000001, 16.428599999999999), (7.5, 2.09091), (145.30000000000001, 13.7507),
(2064.1999999999998, 170.78800000000001), (6483.1000000000004, 231.233), (399.10000000000002,
6589.2399999999998), (5789.6000000000004, 10130.299999999999), (9468.2999999999993,
4259.2600000000002), (1445.0, 34.543700000000001), (544.89999999999998, 2.7040999999999999),
(9.8000000000000007, 7.9310299999999998), (875.89999999999998, 53488.400000000001),
(295.30000000000001, 54.761899999999997), (24.800000000000001, 450.98000000000002),
(9.8000000000000007, 13.529400000000001), (1372.5, 16428.599999999999), (348.5,
33.823500000000003), (0.90000000000000002, 1.9438599999999999), (375.19999999999999, 1045.45),
(86.700000000000003, 74.789299999999997), (196.80000000000001, 920.0), (91.0, 34.517299999999999),
(396.10000000000002, 821.42899999999997), (81.700000000000003, 6.0526299999999997),
(5.4000000000000004, 3.4328400000000001), (494.69999999999999, 4061.96), (133.0,
26.364699999999999), (2.7999999999999998, 1.5333300000000001), (29258.400000000001, 460000.0),
(39836.400000000001, 100000.0), (8263.6000000000004, 10774.299999999999), (3795.1999999999998,
22952.700000000001), (1897.8, 884.61500000000001), (3398.8000000000002, 4035.0900000000001),
(121.5, 1779.04), (3144.1999999999998, 50000.0), (69321.800000000003, 115000.0),
(6019.3999999999996, 582.62900000000002), (1.3, 76.666700000000006), (8979.7000000000007,
13303.700000000001), (11626.5, 442.81299999999999), (15622.5, 9417.3799999999992), (1158750.0,
766667.0), (277013.0, 766667.0), (15045.299999999999, 18330.299999999999), (32308.0,
18274.700000000001), (2285.9000000000001, 43590.599999999999), (40165.199999999997,
21776.799999999999), (9160.5, 6764.71), (772734.0, 74193.5), (25931.0, 50000.0), (163399.0,
5897.4399999999996), (307.19999999999999, 2.86212), (8647.5, 50863.400000000001),
(4.2999999999999998, 5.2272699999999999), (287.80000000000001, 190.85599999999999),
(886.60000000000002, 638.88900000000001), (1002.2, 1.0), (331.69999999999999, 135.416),
(2952.5999999999999, 14112.799999999999), (416.10000000000002, 5522.8400000000001), (249.0,
120.767), (384.5, 15921.6), (61.200000000000003, 56.0976), (644.0, 6969.6999999999998), (508.5,
40.350900000000003), (145.09999999999999, 18.5822), (1176.9000000000001, 10952.4),
(5.7999999999999998, 1.5333300000000001), (2.7999999999999998, 1.0), (7.0999999999999996, 1.0),
(120.7, 18.596), (3492.0999999999999, 57411.599999999999), (164.80000000000001,
9.4171499999999995), (16443.0, 50000.0), (13.300000000000001, 7805.2700000000004),
(4.0999999999999996, 1.0), (340.89999999999998, 176.923), (196.59999999999999,
10.211600000000001), (5.0, 3.5561799999999999), (1386.2, 175.114), (4529.8000000000002,
1315.4100000000001), (4056.8000000000002, 3924.46)]
auc_cutoff = 50
ax = subplot(111)
# Axis scale must be set prior to declaring the Formatter
# If it is not the Formatter will use the default log labels for ticks.
ax.set_xscale('log')
ax.set_yscale('log')
formatter = FuncFormatter(log10Product)
ax.xaxis.set_major_formatter(formatter)
ax.yaxis.set_major_formatter(formatter)
tp_prediction_experiment = [[x[0], x[1]] for x in prediction_experiment if x[1] < auc_cutoff]
tn_prediction_experiment = [[x[0], x[1]] for x in prediction_experiment if x[1] > auc_cutoff]
ax.scatter( [x[1] for x in tn_prediction_experiment], [x[0] for x in tn_prediction_experiment],
s=8, c='r', marker='s', faceted=False)
ax.scatter( [x[1] for x in tp_prediction_experiment], [x[0] for x in tp_prediction_experiment],
s=8, c='b', marker='s', faceted=False)
# set the x and y limits of the plot to the upward nearest exact log decade of the max vertice
max_xlim = roundUpLogDecade(max([x[1] for x in prediction_experiment]))
max_ylim = roundUpLogDecade(max([x[0] for x in prediction_experiment]))
# Must add 1 to allow the last decades label to be shown
print max_xlim
print max_ylim
ax.set_xlim(1e-1, max_xlim+1)
ax.set_ylim(1e-1, max_ylim+1)
grid(True)
xlabel(r"Experimental IC50 [nM]", fontsize = 12)
ylabel(r"Prediction", fontsize = 12)
show()
__________________________________________________
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|
|
From: David C. <dav...@gm...> - 2006-03-03 14:39:50
|
SSBjYW1lIGFjcm9zcyB0aGUgc2FtZSBwcm9ibGVtLCBidXQgd2FzIGFibGUgdG8Kb3ZlcmNvbWUg aXQgYnkgc2V0dGluZyB0aGUgTEFORyBlbnZpcm9ubWVudAp2YXJpYWJsZSB0byAiQyIgcmF0aGVy IHRoYW4gImVuX1VTLlVURi04IgoKQ2hlZXJzLAogIERhdmUK |
|
From: Toon V. <Too...@UG...> - 2006-03-03 13:30:16
|
Hi, Is there a clean way to give absolute coordinates (i.e. 2cm or O.3in) to methods and functions like these: Axes.set_position pylab.subplots_adjus regards, Toon |
|
From: Darren D. <dd...@co...> - 2006-03-03 10:39:23
|
On Friday 03 March 2006 3:10 am, Emmanuel Pecontal wrote:
> Hi Antoine,
>
> I had exactly the same problem. I tracked it and found that in the
> setupext.py, when I tried to print the module.library_dirs variable after
> the command:
> module.library_dirs.extend([o.tcl_lib, o.tk_lib])
> I got:
> ['/usr/share/tcl/tcl8.4/../', u'/usr/share/tcl/tk8.4/../']
> The string containing the tk library path is a unicode one for some reason
> I do not understand. I changed then the line which fills this string. It =
is
> in the function find_tcltk(): of setupext.py:
> o.tk_lib =3D os.path.join(tk.getvar('tk_library'), '../')
> I replaced it by:
> o.tk_lib =3D os.path.join(str(tk.getvar('tk_library')), '../')
>
> And that did the trick.
> I really don't understand why the tcl library string is not affected by t=
he
> same problem anyway...
But this fix was committed back on Feb 2, and is included in mpl-0.87.
> Le Vendredi 3 Mars 2006 02:48, Antoine Latter a =C3=A9crit=C2=A0:
> > I tried to build matplot lib (both 0.87 and 0.86.2) on Ubuntu Linux 5.1=
0.
> > The first set of error messages convinced me to install the Tcl and Tk
> > dev packages.
> >
> > The second run of errors is just really weird, and I'm not sure how to
> > fix it.
> >
> > Thanks,
> > Antoine
> >
> >
> >
> > First run or errors
> > =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> > src/_tkagg.cpp:28:18: error: tk.h: No such file or directory
> > src/_tkagg.cpp:36: error: ISO C++ forbids declaration of =E2=80=98Tcl_I=
nterp=E2=80=99
> > with no type
> > src/_tkagg.cpp:36: error: expected =E2=80=98;=E2=80=99 before =E2=80=98=
*=E2=80=99 token
> > src/_tkagg.cpp:40: error: =E2=80=98ClientData=E2=80=99 was not declared=
in this scope
> > src/_tkagg.cpp:40: error: =E2=80=98Tcl_Interp=E2=80=99 was not declared=
in this scope
> > src/_tkagg.cpp:40: error: =E2=80=98interp=E2=80=99 was not declared in =
this scope
> > src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98i=
nt=E2=80=99
> > src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98c=
har=E2=80=99
> > src/_tkagg.cpp:41: error: initializer expression list treated as compou=
nd
> > expression
> > src/_tkagg.cpp:42: error: expected =E2=80=98,=E2=80=99 or =E2=80=98;=E2=
=80=99 before =E2=80=98{=E2=80=99 token
> > src/_tkagg.cpp: In function =E2=80=98PyObject* _tkinit(PyObject*, PyObj=
ect*)=E2=80=99:
> > src/_tkagg.cpp:176: error: =E2=80=98Tcl_Interp=E2=80=99 was not declare=
d in this scope
> > src/_tkagg.cpp:176: error: =E2=80=98interp=E2=80=99 was not declared in=
this scope
> > src/_tkagg.cpp:185: error: expected primary-expression before =E2=80=98=
)=E2=80=99 token
> > src/_tkagg.cpp:185: error: expected `;' before =E2=80=98arg=E2=80=99
> > src/_tkagg.cpp:190: error: =E2=80=98struct TkappObject=E2=80=99 has no =
member named
> > =E2=80=98interp=E2=80=99 src/_tkagg.cpp:196: error: =E2=80=98Tcl_CmdPro=
c=E2=80=99 was not declared in
> > this scope src/_tkagg.cpp:196: error: expected primary-expression before
> > =E2=80=98)=E2=80=99 token src/_tkagg.cpp:197: error: =E2=80=98ClientDat=
a=E2=80=99 was not declared in
> > this scope src/_tkagg.cpp:197: error: =E2=80=98Tcl_CmdDeleteProc=E2=80=
=99 was not
> > declared in this scope src/_tkagg.cpp:197: error: expected
> > primary-expression before =E2=80=98)=E2=80=99 token src/_tkagg.cpp:197:=
error:
> > =E2=80=98Tcl_CreateCommand=E2=80=99 was not declared in this scope ./CX=
X/Extensions.hxx:
> > In constructor
> > =E2=80=98Py::PythonExtension<T>::PythonExtension() [with T =3D BufferRe=
gion]=E2=80=99:
> > =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> >
> >
> >
> > Second run of errors
> > =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> > g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o
> > build/temp.linux-i686-2.4/CXX/cxx_extensions.o
> > build/temp.linux-i686-2.4/CXX/cxxsupport.o
> > build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o
> > build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L=
/
> > u s r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib
> > -ltk8.4 -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o
> > build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so
> > g++: L: No such file or directory
> > g++: u: No such file or directory
> > g++: s: No such file or directory
> > g++: r: No such file or directory
> > g++: l: No such file or directory
> > g++: i: No such file or directory
> > g++: b: No such file or directory
> > g++: t: No such file or directory
> > g++: k: No such file or directory
> > g++: 8: No such file or directory
> > g++: 4: No such file or directory
> > g++: -E or -x required when input is from standard input
> > g++: L: No such file or directory
> > g++: u: No such file or directory
> > g++: s: No such file or directory
> > g++: r: No such file or directory
> > g++: l: No such file or directory
> > g++: i: No such file or directory
> > g++: b: No such file or directory
> > g++: t: No such file or directory
> > g++: k: No such file or directory
> > g++: 8: No such file or directory
> > g++: 4: No such file or directory
> > g++: -E or -x required when input is from standard input
> > error: Command "g++ -pthread -shared
> > build/temp.linux-i686-2.4/src/_tkagg.o
> > build/temp.linux-i686-2.4/CXX/cxx_extensions.o
> > build/temp.linux-i686-2.4/CXX/cxxsupport.o
> > build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o
> > build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L=
/
> > u s r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib
> > -ltk8.4 -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o
> > build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so" failed with exit
> > status 1
> > =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> >
> >
> > -------------------------------------------------------
> > This SF.Net email is sponsored by xPML, a groundbreaking scripting
> > language that extends applications into web and mobile media. Attend the
> > live webcast and join the prime developer group breaking into this new
> > coding territory!
> > http://sel.as-us.falkag.net/sel?cmd=3Dlnk&kid=110944&bid$1720&dat=121642
> > _______________________________________________
> > Matplotlib-users mailing list
> > Mat...@li...
> > https://lists.sourceforge.net/lists/listinfo/matplotlib-users
=2D-=20
Darren S. Dale, Ph.D.
dd...@co...
|
|
From: <kei...@bt...> - 2006-03-03 09:55:51
|
What is the status of the cairo pdf backend? I installed it, but got a = python error at line 257 of backend_cairo.py. _.get_rgb() doesn't make sense to me, so I changed it to gc.get_rgb(). = Now everything runs without error, but the generated pdf file is 42Mb = even for a simple plot. And there is a font problem. Keith |
|
From: Emmanuel P. <pec...@ob...> - 2006-03-03 08:10:26
|
Hi Antoine,
I had exactly the same problem. I tracked it and found that in the=20
setupext.py, when I tried to print the module.library_dirs variable after t=
he=20
command:
module.library_dirs.extend([o.tcl_lib, o.tk_lib])
I got:
['/usr/share/tcl/tcl8.4/../', u'/usr/share/tcl/tk8.4/../']
The string containing the tk library path is a unicode one for some reason =
I=20
do not understand. I changed then the line which fills this string. It is i=
n=20
the function find_tcltk(): of setupext.py:
o.tk_lib =3D os.path.join(tk.getvar('tk_library'), '../')
I replaced it by:
o.tk_lib =3D os.path.join(str(tk.getvar('tk_library')), '../')
And that did the trick.
I really don't understand why the tcl library string is not affected by the=
=20
same problem anyway...
Emmanuel
Le Vendredi 3 Mars 2006 02:48, Antoine Latter a =C3=A9crit=C2=A0:
> I tried to build matplot lib (both 0.87 and 0.86.2) on Ubuntu Linux 5.10.=
=20
> The first set of error messages convinced me to install the Tcl and Tk dev
> packages.
>
> The second run of errors is just really weird, and I'm not sure how to fix
> it.
>
> Thanks,
> Antoine
>
>
>
> First run or errors
> =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> src/_tkagg.cpp:28:18: error: tk.h: No such file or directory
> src/_tkagg.cpp:36: error: ISO C++ forbids declaration of =E2=80=98Tcl_Int=
erp=E2=80=99 with
> no type
> src/_tkagg.cpp:36: error: expected =E2=80=98;=E2=80=99 before =E2=80=98*=
=E2=80=99 token
> src/_tkagg.cpp:40: error: =E2=80=98ClientData=E2=80=99 was not declared i=
n this scope
> src/_tkagg.cpp:40: error: =E2=80=98Tcl_Interp=E2=80=99 was not declared i=
n this scope
> src/_tkagg.cpp:40: error: =E2=80=98interp=E2=80=99 was not declared in th=
is scope
> src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98int=
=E2=80=99
> src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98cha=
r=E2=80=99
> src/_tkagg.cpp:41: error: initializer expression list treated as compound
> expression
> src/_tkagg.cpp:42: error: expected =E2=80=98,=E2=80=99 or =E2=80=98;=E2=
=80=99 before =E2=80=98{=E2=80=99 token
> src/_tkagg.cpp: In function =E2=80=98PyObject* _tkinit(PyObject*, PyObjec=
t*)=E2=80=99:
> src/_tkagg.cpp:176: error: =E2=80=98Tcl_Interp=E2=80=99 was not declared =
in this scope
> src/_tkagg.cpp:176: error: =E2=80=98interp=E2=80=99 was not declared in t=
his scope
> src/_tkagg.cpp:185: error: expected primary-expression before =E2=80=98)=
=E2=80=99 token
> src/_tkagg.cpp:185: error: expected `;' before =E2=80=98arg=E2=80=99
> src/_tkagg.cpp:190: error: =E2=80=98struct TkappObject=E2=80=99 has no me=
mber named
> =E2=80=98interp=E2=80=99 src/_tkagg.cpp:196: error: =E2=80=98Tcl_CmdProc=
=E2=80=99 was not declared in this
> scope src/_tkagg.cpp:196: error: expected primary-expression before =E2=
=80=98)=E2=80=99
> token src/_tkagg.cpp:197: error: =E2=80=98ClientData=E2=80=99 was not dec=
lared in this
> scope src/_tkagg.cpp:197: error: =E2=80=98Tcl_CmdDeleteProc=E2=80=99 was =
not declared in
> this scope src/_tkagg.cpp:197: error: expected primary-expression before
> =E2=80=98)=E2=80=99 token src/_tkagg.cpp:197: error: =E2=80=98Tcl_CreateC=
ommand=E2=80=99 was not declared
> in this scope ./CXX/Extensions.hxx: In constructor
> =E2=80=98Py::PythonExtension<T>::PythonExtension() [with T =3D BufferRegi=
on]=E2=80=99:
> =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
>
>
>
> Second run of errors
> =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
> g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o
> build/temp.linux-i686-2.4/CXX/cxx_extensions.o
> build/temp.linux-i686-2.4/CXX/cxxsupport.o
> build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o
> build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L /=
u
> s r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4
> -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o
> build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so
> g++: L: No such file or directory
> g++: u: No such file or directory
> g++: s: No such file or directory
> g++: r: No such file or directory
> g++: l: No such file or directory
> g++: i: No such file or directory
> g++: b: No such file or directory
> g++: t: No such file or directory
> g++: k: No such file or directory
> g++: 8: No such file or directory
> g++: 4: No such file or directory
> g++: -E or -x required when input is from standard input
> g++: L: No such file or directory
> g++: u: No such file or directory
> g++: s: No such file or directory
> g++: r: No such file or directory
> g++: l: No such file or directory
> g++: i: No such file or directory
> g++: b: No such file or directory
> g++: t: No such file or directory
> g++: k: No such file or directory
> g++: 8: No such file or directory
> g++: 4: No such file or directory
> g++: -E or -x required when input is from standard input
> error: Command "g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg=
=2Eo
> build/temp.linux-i686-2.4/CXX/cxx_extensions.o
> build/temp.linux-i686-2.4/CXX/cxxsupport.o
> build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o
> build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L /=
u
> s r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4
> -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o
> build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so" failed with exit
> status 1
> =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
>
>
> -------------------------------------------------------
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From: Robert K. <rob...@gm...> - 2006-03-03 01:57:49
|
Antoine Latter wrote: > I tried to build matplot lib (both 0.87 and 0.86.2) on Ubuntu Linux 5.10. The > first set of error messages convinced me to install the Tcl and Tk dev > packages. > > The second run of errors is just really weird, and I'm not sure how to fix it. > Second run of errors > =============== > g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o > build/temp.linux-i686-2.4/CXX/cxx_extensions.o > build/temp.linux-i686-2.4/CXX/cxxsupport.o > build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o > build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L / u s > r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4 > -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o > build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so > g++: L: No such file or directory > g++: u: No such file or directory > g++: s: No such file or directory > g++: r: No such file or directory > g++: l: No such file or directory > g++: i: No such file or directory > g++: b: No such file or directory > g++: t: No such file or directory > g++: k: No such file or directory > g++: 8: No such file or directory > g++: 4: No such file or directory > g++: -E or -x required when input is from standard input > g++: L: No such file or directory > g++: u: No such file or directory > g++: s: No such file or directory > g++: r: No such file or directory > g++: l: No such file or directory > g++: i: No such file or directory > g++: b: No such file or directory > g++: t: No such file or directory > g++: k: No such file or directory > g++: 8: No such file or directory > g++: 4: No such file or directory > g++: -E or -x required when input is from standard input > error: Command "g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o > build/temp.linux-i686-2.4/CXX/cxx_extensions.o > build/temp.linux-i686-2.4/CXX/cxxsupport.o > build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o > build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L / u s > r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4 > -ltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o > build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so" failed with exit > status 1 > =============== Whatever you set to '/usr/lib/tk8.4/../' needs to be a list ['/usr/lib/tk8.4/../'] and not a string. -- Robert Kern rob...@gm... "In the fields of hell where the grass grows high Are the graves of dreams allowed to die." -- Richard Harter |
|
From: Antoine L. <al...@ca...> - 2006-03-03 01:49:41
|
I tried to build matplot lib (both 0.87 and 0.86.2) on Ubuntu Linux 5.10. =
The=20
first set of error messages convinced me to install the Tcl and Tk dev=20
packages.
The second run of errors is just really weird, and I'm not sure how to fix =
it.
Thanks,
Antoine
=46irst run or errors
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
src/_tkagg.cpp:28:18: error: tk.h: No such file or directory
src/_tkagg.cpp:36: error: ISO C++ forbids declaration of =E2=80=98Tcl_Inter=
p=E2=80=99 with no=20
type
src/_tkagg.cpp:36: error: expected =E2=80=98;=E2=80=99 before =E2=80=98*=E2=
=80=99 token
src/_tkagg.cpp:40: error: =E2=80=98ClientData=E2=80=99 was not declared in =
this scope
src/_tkagg.cpp:40: error: =E2=80=98Tcl_Interp=E2=80=99 was not declared in =
this scope
src/_tkagg.cpp:40: error: =E2=80=98interp=E2=80=99 was not declared in this=
scope
src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98int=
=E2=80=99
src/_tkagg.cpp:41: error: expected primary-expression before =E2=80=98char=
=E2=80=99
src/_tkagg.cpp:41: error: initializer expression list treated as compound=20
expression
src/_tkagg.cpp:42: error: expected =E2=80=98,=E2=80=99 or =E2=80=98;=E2=80=
=99 before =E2=80=98{=E2=80=99 token
src/_tkagg.cpp: In function =E2=80=98PyObject* _tkinit(PyObject*, PyObject*=
)=E2=80=99:
src/_tkagg.cpp:176: error: =E2=80=98Tcl_Interp=E2=80=99 was not declared in=
this scope
src/_tkagg.cpp:176: error: =E2=80=98interp=E2=80=99 was not declared in thi=
s scope
src/_tkagg.cpp:185: error: expected primary-expression before =E2=80=98)=E2=
=80=99 token
src/_tkagg.cpp:185: error: expected `;' before =E2=80=98arg=E2=80=99
src/_tkagg.cpp:190: error: =E2=80=98struct TkappObject=E2=80=99 has no memb=
er named =E2=80=98interp=E2=80=99
src/_tkagg.cpp:196: error: =E2=80=98Tcl_CmdProc=E2=80=99 was not declared i=
n this scope
src/_tkagg.cpp:196: error: expected primary-expression before =E2=80=98)=E2=
=80=99 token
src/_tkagg.cpp:197: error: =E2=80=98ClientData=E2=80=99 was not declared in=
this scope
src/_tkagg.cpp:197: error: =E2=80=98Tcl_CmdDeleteProc=E2=80=99 was not decl=
ared in this scope
src/_tkagg.cpp:197: error: expected primary-expression before =E2=80=98)=E2=
=80=99 token
src/_tkagg.cpp:197: error: =E2=80=98Tcl_CreateCommand=E2=80=99 was not decl=
ared in this scope
=2E/CXX/Extensions.hxx: In constructor=20
=E2=80=98Py::PythonExtension<T>::PythonExtension() [with T =3D BufferRegion=
]=E2=80=99:
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
Second run of errors
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o=20
build/temp.linux-i686-2.4/CXX/cxx_extensions.o=20
build/temp.linux-i686-2.4/CXX/cxxsupport.o=20
build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o=20
build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L / u=
s=20
r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4=20
=2Dltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o=20
build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so
g++: L: No such file or directory
g++: u: No such file or directory
g++: s: No such file or directory
g++: r: No such file or directory
g++: l: No such file or directory
g++: i: No such file or directory
g++: b: No such file or directory
g++: t: No such file or directory
g++: k: No such file or directory
g++: 8: No such file or directory
g++: 4: No such file or directory
g++: -E or -x required when input is from standard input
g++: L: No such file or directory
g++: u: No such file or directory
g++: s: No such file or directory
g++: r: No such file or directory
g++: l: No such file or directory
g++: i: No such file or directory
g++: b: No such file or directory
g++: t: No such file or directory
g++: k: No such file or directory
g++: 8: No such file or directory
g++: 4: No such file or directory
g++: -E or -x required when input is from standard input
error: Command "g++ -pthread -shared build/temp.linux-i686-2.4/src/_tkagg.o=
=20
build/temp.linux-i686-2.4/CXX/cxx_extensions.o=20
build/temp.linux-i686-2.4/CXX/cxxsupport.o=20
build/temp.linux-i686-2.4/CXX/IndirectPythonInterface.o=20
build/temp.linux-i686-2.4/CXX/cxxextensions.o -L/usr/lib/tcl8.4/../ - L / u=
s=20
r / l i b / t k 8 . 4 / . . / -L/usr/local/lib -L/usr/local/lib -ltk8.4=20
=2Dltcl8.4 -lpng -lz -lstdc++ -lm -lfreetype -lz -lstdc++ -lm -o=20
build/lib.linux-i686-2.4/matplotlib/backends/_tkagg.so" failed with exit=20
status 1
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
|
