Simple Answer:
You can do this using a Date to count the number of days since the unix epoch, and mod that count by the length of your phones array to get an index that moves to the next item every 24 hours:
let phones = ["phonen1", "phonen2", "phonen3", "phonen4"];
const ms_per_day = 24 * 60 * 60 * 1000;
// (new Date()).getTime() gets the number of ms since 1 January 1970 00:00:00 UTC
// we divide by ms_per_day and floor to get the number of 24-hour cycles (this will increment each UTC day)
let days_since_epoch = Math.floor((new Date()).getTime() / ms_per_day);
// we mod by the length of phones to get a number in the range [0, phones.length)
let phones_index = days_since_epoch % phones.length;
document.getElementById("whatsapp").href = "https://api.whatsapp.com/send?phone=5519" + phones[phones_index];
console.log("Set link to", document.getElementById("whatsapp").href);
<a id="whatsapp" target="_blank" href="https://api.whatsapp.com/send?phone=5519997820734"> Link </a>
Caveats:
Working with time is complicated. The above method doesn't get the number of days exactly:
Due to the differing lengths of days (due to daylight saving changeover), months and years, expressing elapsed time in units greater than hours, minutes and seconds requires addressing a number of issues and should be thoroughly researched before being attempted.
...and the crossover time is in UTC anyway, so it's non-obvious when the above code will switch numbers (it won't be at midnight). But it will do so once every 24 hours, which should be sufficient for the use case described in the post.
One other caveat is that the number won't actually change until the user refreshes the page and reruns the script.
Math.random()?phones[d % phones.length]wheredis the day number, starting withd = 0