How should I separate drawing from system collision?

Well, in my game while I'm drawing I have to verify the collision between the views. After a collision, I have to draw some things. But I can't draw them with a batch but with a stage. So I have to begin and end a lot of batches and this makes my game very slow.

Here is the part of code which I talked about:

for(int i=0;i<1000;i++)
    {
        if(i<999)
            list.get(i+1).xTubo = list.get(i).xTubo + list.get(i).distanza;

        for(int j=0;j<=60;j++)
        {
            if( (xPersonaggio==list.get(i).xTubo + j || xPersonaggio==list.get(i).xTubo-j*3)&& yPersonaggio<=list.get(i).altezza-50)
            {
                batch.begin();
                if(ySalto==0)
                    batch.draw((TextureRegion) animation.getKeyFrame(time, true), orthographicCamera.position.x - 300, 60 + ySalto);
                else
                    batch.draw(textureAtlas.createSprite("h"), orthographicCamera.position.x - 300, 60 + ySalto);
                scrittaHaiPerso.draw(batch,"HAI PERSO!",orthographicCamera.position.x-50,500);
                menu.draw(batch,"MENU",orthographicCamera.position.x,300);
                batch.end();
                stage.draw();

                fineGioco=true;
            }
        }
        batch.begin();
        batch.draw(spriteTuboVerde,list.get(i).xTubo,-30,120,list.get(i).altezza);
        batch.end();
        if(xPersonaggio>list.get(i).xTubo+50)
            tubiSaltati++;
    }

In this cycle I draw a lot of views, as you can see at the bottom. At the top I have my very rudimental collision system. When a collision happens, an imagebutton appears on the screen and I have to draw it with a stage. So I have to begin and ends a lot of times the batch and this doesn't go well at all. How can I write less batches?

NOTE: The order of drawing has to be this