I resolved this issue using the following spring-boot-maven-plugin configuration, I had to build my Uber jar without excluded artifacts to create my external "lib" directory, then I added my excluded artifacts again and packaged my Uber jar with my application specific dependencies only.
<plugin>
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-maven-plugin</artifactId>
<version>1.3.1.RELEASE</version>
<configuration>
<layout>ZIP</layout>
<executable>true</executable>
<excludeArtifactIds>
<!-- My libs which will be packaged with my Uber jar-->
<!-- core,data-feeder,engine,lightspeed-tcp-api,order-manager,store,strategies,utils,viewer -->
<!-- Other libs -->
antlr,aopalliance,aspectjrt,aspectjweaver,classmate,commons-lang,
dom4j,h2,hibernate-commons-annotations,hibernate-core,hibernate-entitymanager,
hibernate-jpa-2.1-api,hibernate-validator,jackson-annotations,jackson-core,jackson-databind,
jandex,javassist,javax.transaction-api,jboss-logging,jboss-logging-annotations,jcl-over-slf4j,
jul-to-slf4j,log4j-over-slf4j,logback-classic,logback-core,mysql-connector-java,slf4j-api,
snakeyaml,spring-aop,spring-aspects,spring-beans,spring-boot,spring-boot-autoconfigure,
spring-boot-starter,spring-boot-starter-aop,spring-boot-starter-data-jpa,spring-boot-starter-jdbc,
spring-boot-starter-logging,spring-boot-starter-tomcat,spring-boot-starter-web,
spring-boot-starter-websocket,spring-context,spring-core,spring-data-commons,spring-data-jpa,
spring-expression,spring-jdbc,spring-messaging,spring-orm,spring-tx,spring-web,spring-webmvc,
spring-websocket,tomcat-embed-core,tomcat-embed-el,tomcat-embed-logging-juli,tomcat-embed-websocket,
tomcat-jdbc,tomcat-juli,validation-api,xml-apis
</excludeArtifactIds>
</configuration>
<executions>
<execution>
<goals>
<goal>repackage</goal>
</goals>
</execution>
</executions>
</plugin>
Then, I added the following property to my "application.properties" which inside my jar "resources/" dir to specify my "lib" dir for Spring PropertiesLauncher where I put "lib" dir along with my jar in the same dir.
loader.path=lib/
Finally, I did run my jar using the following command
java -jar back-tester-0.0.1-beta-01.jar
Also, you can add the "loader.path" property to your command line without putting it in your "application.properties" like the following command but this way didn't work with me as I packaged my jar as an executable one which I'm running as linux service.
java -Dloader.path="lib/" -jar back-tester-0.0.1-beta-01.jar
Now, I successfully reduced my jar size from 29 M to only 1 M jar which contains only my application specific libs and it works out of the box.